BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H01LP1|AL425026
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig432 958 0.0
>3x_Contig432
Length = 1594
Score = 958 bits (477), Expect = 0.0
Identities = 690/761 (90%), Gaps = 13/761 (1%)
Strand = Plus / Plus
Query: 31 tagctgagataaacgaggagagtccgtttcacctttcaaaractgactcacacgctgtga 90
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tagctgagataaacgaggagagtccgtttcacctttcaaaaactgactcacacgctgtga 60
Query: 91 gtgattataatccaagtkaccatcattcattagtgcctactagaagcattagccagatga 150
|| |||||||||||||| |||||||||||||||||||| ||||||||||| ||| |||||
Sbjct: 61 gtcattataatccaagtaaccatcattcattagtgcct-ctagaagcatt-gcc-gatga 117
Query: 151 tactgattctcatcttgtcatcatccattacacattctatgcaaaacaagtaaggaagtt 210
||||||||||| |||||||||| |||||||| |||| ||||||||| ||| | ||||
Sbjct: 118 tactgattctc-tcttgtcatc-tccattacc--ttct-tgcaaaaca-gtagg--agtt 169
Query: 211 tcaaagcttgttaacatcaagaacagactctcgtatacccttcacataatctttgcacaa 270
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcaa-gcttgttaacatcaagaacagactctcgtatacccttcacataatctttgcacaa 228
Query: 271 tcgcagatatgccatcacatcagtccaaaaatcgagatacactatggcatgggggtattg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcgcagatatgccatcacatcagtccaaaaatcgagatacactatggcatgggggtattg 288
Query: 331 ggacaggtaagtttagaaggrccataaatccaaaggcgcas-ggtttgttggtttaatac 389
|||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 289 ggacaggtaagtatagaaggaccataaatccaaaggcgcagcggtttgttggtttaatac 348
Query: 390 ttcatatagagtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgc 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttcatatagagtgggtaagcgggctcgctgggaatttggcaatttttccatgactattgc 408
Query: 450 tcagcggtttgctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaa 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcagcggtttgctaacactggaatggcttcaaagtgctgttaagatgtccggtatttcaa 468
Query: 510 ttggagccgtttctttgaatattctgtgacaacaacaactacggactggttgagagagat 569
| ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 469 taggagcagtttctttgaatatactgtgacaacaacaactacggactggttgaaagagat 528
Query: 570 aaattatgtttmtcagataamgtgttnggtgcmncttgcmtgttnnttgntgtntttcgn 629
||||||| ||| |||||||| |||| ||||| ||||| |||| ||| || |||||
Sbjct: 529 aaattatatttctcagataacgtgtaaggtgccacttgcctgttaattgaagtatttcga 588
Query: 630 mgncmgttngctnmnmaanmtgncmgttagccattgagtaggtgttggtgngttgtaaat 689
| | ||| ||| || || | |||||| |||||||||| |||||| ||||| |||
Sbjct: 589 cgaccgttagctacacaaactgaccgttagcaattgagtaggaattggtgagttgtcaat 648
Query: 690 atgtatttataatatatgtattttagaatgagttgagtttaagtttaatgattttttttt 749
|||| ||| | || | |||||||||||||||||||||||| ||||| ||| |||||||||
Sbjct: 649 atgtctttctcatctctgtattttagaatgagttgagtttcagtttcatgcttttttttt 708
Query: 750 tttgtaaggaaagataaagaatttttatagmttaggcaaaa 790
||||||||| |||| |||||||||| | | ||||| ||||
Sbjct: 709 tttgtaaggccagatcaagaatttttctcgattaggaaaaa 749
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,888
Number of Sequences: 1807
Number of extensions: 11888
Number of successful extensions: 247
Number of sequences better than 1.0e-20: 1
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)